Showing posts from May, 2016

The Bioinformatics Adventure continues.

According to  the social network LinkedIn, I have been working on optical mapping problems at Gydle Inc. (with Philippe and Marc-Alexandre) for 8 months so far. I previously worked at Argonne National Laboratory (with Fangfang and Rick and other people).

The Bioinformatics Adventure continues. Yes, I am still doing bioinformatics. No, I no longer work on assemblers.

I have not worked on any genome assemblers for a while. As of now, I am more an aligner person than an assembler person (see "Sense from sequence reads: methods for alignment and assembly").

At Gydle Inc, we are 3 employees (the CEO, a computer scientist, and myself). Our CEO worked at Illumina at some point. Working in a small company is very fun. We get to do a lot of different things:

algorithm design,software design,software development,software quality control,test development, ticket management,data analysis,data curation.
I schedule my time around activities related to the development of optical mapping s…